qsprpred.extra package
Subpackages
- qsprpred.extra.data package
- qsprpred.extra.gpu package
- qsprpred.extra.models package
- Submodules
- qsprpred.extra.models.pcm module
PCMModel
PCMModel.checkData()
PCMModel.classPath
PCMModel.cleanFiles()
PCMModel.convertToNumpy()
PCMModel.createPredictionDatasetFromMols()
PCMModel.fit()
PCMModel.fitDataset()
PCMModel.fromFile()
PCMModel.fromJSON()
PCMModel.getParameters()
PCMModel.handleInvalidsInPredictions()
PCMModel.initFromDataset()
PCMModel.initRandomState()
PCMModel.isMultiTask
PCMModel.loadEstimator()
PCMModel.loadEstimatorFromFile()
PCMModel.loadParamsGrid()
PCMModel.metaFile
PCMModel.optimalEpochs
PCMModel.outDir
PCMModel.outPrefix
PCMModel.predict()
PCMModel.predictDataset()
PCMModel.predictMols()
PCMModel.predictProba()
PCMModel.save()
PCMModel.saveEstimator()
PCMModel.setParams()
PCMModel.supportsEarlyStopping
PCMModel.task
PCMModel.toFile()
PCMModel.toJSON()
SklearnPCMModel
SklearnPCMModel.checkData()
SklearnPCMModel.classPath
SklearnPCMModel.cleanFiles()
SklearnPCMModel.convertToNumpy()
SklearnPCMModel.createPredictionDatasetFromMols()
SklearnPCMModel.fit()
SklearnPCMModel.fitDataset()
SklearnPCMModel.fromFile()
SklearnPCMModel.fromJSON()
SklearnPCMModel.getParameters()
SklearnPCMModel.handleInvalidsInPredictions()
SklearnPCMModel.initFromDataset()
SklearnPCMModel.initRandomState()
SklearnPCMModel.isMultiTask
SklearnPCMModel.loadEstimator()
SklearnPCMModel.loadEstimatorFromFile()
SklearnPCMModel.loadParamsGrid()
SklearnPCMModel.metaFile
SklearnPCMModel.optimalEpochs
SklearnPCMModel.outDir
SklearnPCMModel.outPrefix
SklearnPCMModel.predict()
SklearnPCMModel.predictDataset()
SklearnPCMModel.predictMols()
SklearnPCMModel.predictProba()
SklearnPCMModel.save()
SklearnPCMModel.saveEstimator()
SklearnPCMModel.setParams()
SklearnPCMModel.supportsEarlyStopping
SklearnPCMModel.task
SklearnPCMModel.toFile()
SklearnPCMModel.toJSON()
- qsprpred.extra.models.random module
MedianDistributionAlgorithm
RandomDistributionAlgorithm
RandomModel
RandomModel.checkData()
RandomModel.classPath
RandomModel.cleanFiles()
RandomModel.convertToNumpy()
RandomModel.createPredictionDatasetFromMols()
RandomModel.fit()
RandomModel.fitDataset()
RandomModel.fromFile()
RandomModel.fromJSON()
RandomModel.getParameters()
RandomModel.handleInvalidsInPredictions()
RandomModel.initFromDataset()
RandomModel.initRandomState()
RandomModel.isMultiTask
RandomModel.loadEstimator()
RandomModel.loadEstimatorFromFile()
RandomModel.loadParamsGrid()
RandomModel.metaFile
RandomModel.optimalEpochs
RandomModel.outDir
RandomModel.outPrefix
RandomModel.predict()
RandomModel.predictDataset()
RandomModel.predictMols()
RandomModel.predictProba()
RandomModel.save()
RandomModel.saveEstimator()
RandomModel.setParams()
RandomModel.supportsEarlyStopping
RandomModel.task
RandomModel.toFile()
RandomModel.toJSON()
RatioDistributionAlgorithm
ScipyDistributionAlgorithm
- qsprpred.extra.models.tests module
ModelDataSetsMixInExtras
ModelDataSetsMixInExtras.clearGenerated()
ModelDataSetsMixInExtras.createLargeMultitaskDataSet()
ModelDataSetsMixInExtras.createLargeTestDataSet()
ModelDataSetsMixInExtras.createPCMDataSet()
ModelDataSetsMixInExtras.createSmallTestDataSet()
ModelDataSetsMixInExtras.createTestDataSetFromFrame()
ModelDataSetsMixInExtras.getAllDescriptors()
ModelDataSetsMixInExtras.getAllProteinDescriptors()
ModelDataSetsMixInExtras.getBigDF()
ModelDataSetsMixInExtras.getDataPrepGrid()
ModelDataSetsMixInExtras.getDefaultCalculatorCombo()
ModelDataSetsMixInExtras.getDefaultPrep()
ModelDataSetsMixInExtras.getMSAProvider()
ModelDataSetsMixInExtras.getPCMDF()
ModelDataSetsMixInExtras.getPCMSeqProvider()
ModelDataSetsMixInExtras.getPCMTargetsDF()
ModelDataSetsMixInExtras.getPrepCombos()
ModelDataSetsMixInExtras.getSmallDF()
ModelDataSetsMixInExtras.setUpPaths()
ModelDataSetsMixInExtras.tearDown()
ModelDataSetsMixInExtras.validate_split()
RandomBaseModelTestCase
RandomBaseModelTestCase.addClassCleanup()
RandomBaseModelTestCase.addCleanup()
RandomBaseModelTestCase.addTypeEqualityFunc()
RandomBaseModelTestCase.assertAlmostEqual()
RandomBaseModelTestCase.assertCountEqual()
RandomBaseModelTestCase.assertDictEqual()
RandomBaseModelTestCase.assertEqual()
RandomBaseModelTestCase.assertFalse()
RandomBaseModelTestCase.assertGreater()
RandomBaseModelTestCase.assertGreaterEqual()
RandomBaseModelTestCase.assertIn()
RandomBaseModelTestCase.assertIs()
RandomBaseModelTestCase.assertIsInstance()
RandomBaseModelTestCase.assertIsNone()
RandomBaseModelTestCase.assertIsNot()
RandomBaseModelTestCase.assertIsNotNone()
RandomBaseModelTestCase.assertLess()
RandomBaseModelTestCase.assertLessEqual()
RandomBaseModelTestCase.assertListEqual()
RandomBaseModelTestCase.assertLogs()
RandomBaseModelTestCase.assertMultiLineEqual()
RandomBaseModelTestCase.assertNoLogs()
RandomBaseModelTestCase.assertNotAlmostEqual()
RandomBaseModelTestCase.assertNotEqual()
RandomBaseModelTestCase.assertNotIn()
RandomBaseModelTestCase.assertNotIsInstance()
RandomBaseModelTestCase.assertNotRegex()
RandomBaseModelTestCase.assertRaises()
RandomBaseModelTestCase.assertRaisesRegex()
RandomBaseModelTestCase.assertRegex()
RandomBaseModelTestCase.assertSequenceEqual()
RandomBaseModelTestCase.assertSetEqual()
RandomBaseModelTestCase.assertTrue()
RandomBaseModelTestCase.assertTupleEqual()
RandomBaseModelTestCase.assertWarns()
RandomBaseModelTestCase.assertWarnsRegex()
RandomBaseModelTestCase.checkOptimization()
RandomBaseModelTestCase.clearGenerated()
RandomBaseModelTestCase.countTestCases()
RandomBaseModelTestCase.createLargeMultitaskDataSet()
RandomBaseModelTestCase.createLargeTestDataSet()
RandomBaseModelTestCase.createPCMDataSet()
RandomBaseModelTestCase.createSmallTestDataSet()
RandomBaseModelTestCase.createTestDataSetFromFrame()
RandomBaseModelTestCase.debug()
RandomBaseModelTestCase.defaultTestResult()
RandomBaseModelTestCase.doClassCleanups()
RandomBaseModelTestCase.doCleanups()
RandomBaseModelTestCase.enterClassContext()
RandomBaseModelTestCase.enterContext()
RandomBaseModelTestCase.fail()
RandomBaseModelTestCase.failureException
RandomBaseModelTestCase.fitTest()
RandomBaseModelTestCase.getAllDescriptors()
RandomBaseModelTestCase.getAllProteinDescriptors()
RandomBaseModelTestCase.getBigDF()
RandomBaseModelTestCase.getDataPrepGrid()
RandomBaseModelTestCase.getDefaultCalculatorCombo()
RandomBaseModelTestCase.getDefaultPrep()
RandomBaseModelTestCase.getMSAProvider()
RandomBaseModelTestCase.getModel()
RandomBaseModelTestCase.getPCMDF()
RandomBaseModelTestCase.getPCMSeqProvider()
RandomBaseModelTestCase.getPCMTargetsDF()
RandomBaseModelTestCase.getParamGrid()
RandomBaseModelTestCase.getPrepCombos()
RandomBaseModelTestCase.getSmallDF()
RandomBaseModelTestCase.gridFile
RandomBaseModelTestCase.id()
RandomBaseModelTestCase.longMessage
RandomBaseModelTestCase.maxDiff
RandomBaseModelTestCase.predictorTest()
RandomBaseModelTestCase.run()
RandomBaseModelTestCase.setUp()
RandomBaseModelTestCase.setUpClass()
RandomBaseModelTestCase.setUpPaths()
RandomBaseModelTestCase.shortDescription()
RandomBaseModelTestCase.skipTest()
RandomBaseModelTestCase.subTest()
RandomBaseModelTestCase.tearDown()
RandomBaseModelTestCase.tearDownClass()
RandomBaseModelTestCase.validate_split()
TestPCM
TestPCM.addClassCleanup()
TestPCM.addCleanup()
TestPCM.addTypeEqualityFunc()
TestPCM.assertAlmostEqual()
TestPCM.assertCountEqual()
TestPCM.assertDictEqual()
TestPCM.assertEqual()
TestPCM.assertFalse()
TestPCM.assertGreater()
TestPCM.assertGreaterEqual()
TestPCM.assertIn()
TestPCM.assertIs()
TestPCM.assertIsInstance()
TestPCM.assertIsNone()
TestPCM.assertIsNot()
TestPCM.assertIsNotNone()
TestPCM.assertLess()
TestPCM.assertLessEqual()
TestPCM.assertListEqual()
TestPCM.assertLogs()
TestPCM.assertMultiLineEqual()
TestPCM.assertNoLogs()
TestPCM.assertNotAlmostEqual()
TestPCM.assertNotEqual()
TestPCM.assertNotIn()
TestPCM.assertNotIsInstance()
TestPCM.assertNotRegex()
TestPCM.assertRaises()
TestPCM.assertRaisesRegex()
TestPCM.assertRegex()
TestPCM.assertSequenceEqual()
TestPCM.assertSetEqual()
TestPCM.assertTrue()
TestPCM.assertTupleEqual()
TestPCM.assertWarns()
TestPCM.assertWarnsRegex()
TestPCM.checkOptimization()
TestPCM.clearGenerated()
TestPCM.countTestCases()
TestPCM.createLargeMultitaskDataSet()
TestPCM.createLargeTestDataSet()
TestPCM.createPCMDataSet()
TestPCM.createSmallTestDataSet()
TestPCM.createTestDataSetFromFrame()
TestPCM.debug()
TestPCM.defaultTestResult()
TestPCM.doClassCleanups()
TestPCM.doCleanups()
TestPCM.enterClassContext()
TestPCM.enterContext()
TestPCM.fail()
TestPCM.failureException
TestPCM.fitTest()
TestPCM.getAllDescriptors()
TestPCM.getAllProteinDescriptors()
TestPCM.getBigDF()
TestPCM.getDataPrepGrid()
TestPCM.getDefaultCalculatorCombo()
TestPCM.getDefaultPrep()
TestPCM.getMSAProvider()
TestPCM.getModel()
TestPCM.getPCMDF()
TestPCM.getPCMSeqProvider()
TestPCM.getPCMTargetsDF()
TestPCM.getParamGrid()
TestPCM.getPrepCombos()
TestPCM.getSmallDF()
TestPCM.gridFile
TestPCM.id()
TestPCM.longMessage
TestPCM.maxDiff
TestPCM.predictorTest()
TestPCM.run()
TestPCM.setUp()
TestPCM.setUpClass()
TestPCM.setUpPaths()
TestPCM.shortDescription()
TestPCM.skipTest()
TestPCM.subTest()
TestPCM.tearDown()
TestPCM.tearDownClass()
TestPCM.testFittingPCM
TestPCM.testFittingPCM_0_XGBR()
TestPCM.testFittingPCM_1_XGBR()
TestPCM.testFittingPCM_2_XGBR()
TestPCM.testFittingPCM_3_PLSR()
TestPCM.testFittingPCM_4_XGBC()
TestPCM.testFittingPCM_5_XGBC()
TestPCM.testFittingPCM_6_XGBC()
TestPCM.validate_split()
TestRandomModelClassification
TestRandomModelClassification.addClassCleanup()
TestRandomModelClassification.addCleanup()
TestRandomModelClassification.addTypeEqualityFunc()
TestRandomModelClassification.assertAlmostEqual()
TestRandomModelClassification.assertCountEqual()
TestRandomModelClassification.assertDictEqual()
TestRandomModelClassification.assertEqual()
TestRandomModelClassification.assertFalse()
TestRandomModelClassification.assertGreater()
TestRandomModelClassification.assertGreaterEqual()
TestRandomModelClassification.assertIn()
TestRandomModelClassification.assertIs()
TestRandomModelClassification.assertIsInstance()
TestRandomModelClassification.assertIsNone()
TestRandomModelClassification.assertIsNot()
TestRandomModelClassification.assertIsNotNone()
TestRandomModelClassification.assertLess()
TestRandomModelClassification.assertLessEqual()
TestRandomModelClassification.assertListEqual()
TestRandomModelClassification.assertLogs()
TestRandomModelClassification.assertMultiLineEqual()
TestRandomModelClassification.assertNoLogs()
TestRandomModelClassification.assertNotAlmostEqual()
TestRandomModelClassification.assertNotEqual()
TestRandomModelClassification.assertNotIn()
TestRandomModelClassification.assertNotIsInstance()
TestRandomModelClassification.assertNotRegex()
TestRandomModelClassification.assertRaises()
TestRandomModelClassification.assertRaisesRegex()
TestRandomModelClassification.assertRegex()
TestRandomModelClassification.assertSequenceEqual()
TestRandomModelClassification.assertSetEqual()
TestRandomModelClassification.assertTrue()
TestRandomModelClassification.assertTupleEqual()
TestRandomModelClassification.assertWarns()
TestRandomModelClassification.assertWarnsRegex()
TestRandomModelClassification.checkOptimization()
TestRandomModelClassification.clearGenerated()
TestRandomModelClassification.countTestCases()
TestRandomModelClassification.createLargeMultitaskDataSet()
TestRandomModelClassification.createLargeTestDataSet()
TestRandomModelClassification.createPCMDataSet()
TestRandomModelClassification.createSmallTestDataSet()
TestRandomModelClassification.createTestDataSetFromFrame()
TestRandomModelClassification.debug()
TestRandomModelClassification.defaultTestResult()
TestRandomModelClassification.doClassCleanups()
TestRandomModelClassification.doCleanups()
TestRandomModelClassification.enterClassContext()
TestRandomModelClassification.enterContext()
TestRandomModelClassification.fail()
TestRandomModelClassification.failureException
TestRandomModelClassification.fitTest()
TestRandomModelClassification.getAllDescriptors()
TestRandomModelClassification.getAllProteinDescriptors()
TestRandomModelClassification.getBigDF()
TestRandomModelClassification.getDataPrepGrid()
TestRandomModelClassification.getDefaultCalculatorCombo()
TestRandomModelClassification.getDefaultPrep()
TestRandomModelClassification.getMSAProvider()
TestRandomModelClassification.getModel()
TestRandomModelClassification.getPCMDF()
TestRandomModelClassification.getPCMSeqProvider()
TestRandomModelClassification.getPCMTargetsDF()
TestRandomModelClassification.getParamGrid()
TestRandomModelClassification.getPrepCombos()
TestRandomModelClassification.getSmallDF()
TestRandomModelClassification.gridFile
TestRandomModelClassification.id()
TestRandomModelClassification.longMessage
TestRandomModelClassification.maxDiff
TestRandomModelClassification.predictorTest()
TestRandomModelClassification.run()
TestRandomModelClassification.setUp()
TestRandomModelClassification.setUpClass()
TestRandomModelClassification.setUpPaths()
TestRandomModelClassification.shortDescription()
TestRandomModelClassification.skipTest()
TestRandomModelClassification.subTest()
TestRandomModelClassification.tearDown()
TestRandomModelClassification.tearDownClass()
TestRandomModelClassification.testClassificationBasicFit
TestRandomModelClassification.testClassificationBasicFit_0_RandomModel_SINGLECLASS()
TestRandomModelClassification.testClassificationBasicFit_1_RandomModel_SINGLECLASS()
TestRandomModelClassification.testClassificationBasicFit_2_RandomModel_MULTICLASS()
TestRandomModelClassification.testClassificationBasicFit_3_RandomModel_MULTICLASS()
TestRandomModelClassification.validate_split()
TestRandomModelClassificationMultiTask
TestRandomModelClassificationMultiTask.addClassCleanup()
TestRandomModelClassificationMultiTask.addCleanup()
TestRandomModelClassificationMultiTask.addTypeEqualityFunc()
TestRandomModelClassificationMultiTask.assertAlmostEqual()
TestRandomModelClassificationMultiTask.assertCountEqual()
TestRandomModelClassificationMultiTask.assertDictEqual()
TestRandomModelClassificationMultiTask.assertEqual()
TestRandomModelClassificationMultiTask.assertFalse()
TestRandomModelClassificationMultiTask.assertGreater()
TestRandomModelClassificationMultiTask.assertGreaterEqual()
TestRandomModelClassificationMultiTask.assertIn()
TestRandomModelClassificationMultiTask.assertIs()
TestRandomModelClassificationMultiTask.assertIsInstance()
TestRandomModelClassificationMultiTask.assertIsNone()
TestRandomModelClassificationMultiTask.assertIsNot()
TestRandomModelClassificationMultiTask.assertIsNotNone()
TestRandomModelClassificationMultiTask.assertLess()
TestRandomModelClassificationMultiTask.assertLessEqual()
TestRandomModelClassificationMultiTask.assertListEqual()
TestRandomModelClassificationMultiTask.assertLogs()
TestRandomModelClassificationMultiTask.assertMultiLineEqual()
TestRandomModelClassificationMultiTask.assertNoLogs()
TestRandomModelClassificationMultiTask.assertNotAlmostEqual()
TestRandomModelClassificationMultiTask.assertNotEqual()
TestRandomModelClassificationMultiTask.assertNotIn()
TestRandomModelClassificationMultiTask.assertNotIsInstance()
TestRandomModelClassificationMultiTask.assertNotRegex()
TestRandomModelClassificationMultiTask.assertRaises()
TestRandomModelClassificationMultiTask.assertRaisesRegex()
TestRandomModelClassificationMultiTask.assertRegex()
TestRandomModelClassificationMultiTask.assertSequenceEqual()
TestRandomModelClassificationMultiTask.assertSetEqual()
TestRandomModelClassificationMultiTask.assertTrue()
TestRandomModelClassificationMultiTask.assertTupleEqual()
TestRandomModelClassificationMultiTask.assertWarns()
TestRandomModelClassificationMultiTask.assertWarnsRegex()
TestRandomModelClassificationMultiTask.checkOptimization()
TestRandomModelClassificationMultiTask.clearGenerated()
TestRandomModelClassificationMultiTask.countTestCases()
TestRandomModelClassificationMultiTask.createLargeMultitaskDataSet()
TestRandomModelClassificationMultiTask.createLargeTestDataSet()
TestRandomModelClassificationMultiTask.createPCMDataSet()
TestRandomModelClassificationMultiTask.createSmallTestDataSet()
TestRandomModelClassificationMultiTask.createTestDataSetFromFrame()
TestRandomModelClassificationMultiTask.debug()
TestRandomModelClassificationMultiTask.defaultTestResult()
TestRandomModelClassificationMultiTask.doClassCleanups()
TestRandomModelClassificationMultiTask.doCleanups()
TestRandomModelClassificationMultiTask.enterClassContext()
TestRandomModelClassificationMultiTask.enterContext()
TestRandomModelClassificationMultiTask.fail()
TestRandomModelClassificationMultiTask.failureException
TestRandomModelClassificationMultiTask.fitTest()
TestRandomModelClassificationMultiTask.getAllDescriptors()
TestRandomModelClassificationMultiTask.getAllProteinDescriptors()
TestRandomModelClassificationMultiTask.getBigDF()
TestRandomModelClassificationMultiTask.getDataPrepGrid()
TestRandomModelClassificationMultiTask.getDefaultCalculatorCombo()
TestRandomModelClassificationMultiTask.getDefaultPrep()
TestRandomModelClassificationMultiTask.getMSAProvider()
TestRandomModelClassificationMultiTask.getModel()
TestRandomModelClassificationMultiTask.getPCMDF()
TestRandomModelClassificationMultiTask.getPCMSeqProvider()
TestRandomModelClassificationMultiTask.getPCMTargetsDF()
TestRandomModelClassificationMultiTask.getParamGrid()
TestRandomModelClassificationMultiTask.getPrepCombos()
TestRandomModelClassificationMultiTask.getSmallDF()
TestRandomModelClassificationMultiTask.gridFile
TestRandomModelClassificationMultiTask.id()
TestRandomModelClassificationMultiTask.longMessage
TestRandomModelClassificationMultiTask.maxDiff
TestRandomModelClassificationMultiTask.predictorTest()
TestRandomModelClassificationMultiTask.run()
TestRandomModelClassificationMultiTask.setUp()
TestRandomModelClassificationMultiTask.setUpClass()
TestRandomModelClassificationMultiTask.setUpPaths()
TestRandomModelClassificationMultiTask.shortDescription()
TestRandomModelClassificationMultiTask.skipTest()
TestRandomModelClassificationMultiTask.subTest()
TestRandomModelClassificationMultiTask.tearDown()
TestRandomModelClassificationMultiTask.tearDownClass()
TestRandomModelClassificationMultiTask.testClassificationMultiTaskFit
TestRandomModelClassificationMultiTask.testClassificationMultiTaskFit_0_RandomModel()
TestRandomModelClassificationMultiTask.testClassificationMultiTaskFit_1_RandomModel()
TestRandomModelClassificationMultiTask.validate_split()
TestRandomModelRegression
TestRandomModelRegression.addClassCleanup()
TestRandomModelRegression.addCleanup()
TestRandomModelRegression.addTypeEqualityFunc()
TestRandomModelRegression.assertAlmostEqual()
TestRandomModelRegression.assertCountEqual()
TestRandomModelRegression.assertDictEqual()
TestRandomModelRegression.assertEqual()
TestRandomModelRegression.assertFalse()
TestRandomModelRegression.assertGreater()
TestRandomModelRegression.assertGreaterEqual()
TestRandomModelRegression.assertIn()
TestRandomModelRegression.assertIs()
TestRandomModelRegression.assertIsInstance()
TestRandomModelRegression.assertIsNone()
TestRandomModelRegression.assertIsNot()
TestRandomModelRegression.assertIsNotNone()
TestRandomModelRegression.assertLess()
TestRandomModelRegression.assertLessEqual()
TestRandomModelRegression.assertListEqual()
TestRandomModelRegression.assertLogs()
TestRandomModelRegression.assertMultiLineEqual()
TestRandomModelRegression.assertNoLogs()
TestRandomModelRegression.assertNotAlmostEqual()
TestRandomModelRegression.assertNotEqual()
TestRandomModelRegression.assertNotIn()
TestRandomModelRegression.assertNotIsInstance()
TestRandomModelRegression.assertNotRegex()
TestRandomModelRegression.assertRaises()
TestRandomModelRegression.assertRaisesRegex()
TestRandomModelRegression.assertRegex()
TestRandomModelRegression.assertSequenceEqual()
TestRandomModelRegression.assertSetEqual()
TestRandomModelRegression.assertTrue()
TestRandomModelRegression.assertTupleEqual()
TestRandomModelRegression.assertWarns()
TestRandomModelRegression.assertWarnsRegex()
TestRandomModelRegression.checkOptimization()
TestRandomModelRegression.clearGenerated()
TestRandomModelRegression.countTestCases()
TestRandomModelRegression.createLargeMultitaskDataSet()
TestRandomModelRegression.createLargeTestDataSet()
TestRandomModelRegression.createPCMDataSet()
TestRandomModelRegression.createSmallTestDataSet()
TestRandomModelRegression.createTestDataSetFromFrame()
TestRandomModelRegression.debug()
TestRandomModelRegression.defaultTestResult()
TestRandomModelRegression.doClassCleanups()
TestRandomModelRegression.doCleanups()
TestRandomModelRegression.enterClassContext()
TestRandomModelRegression.enterContext()
TestRandomModelRegression.fail()
TestRandomModelRegression.failureException
TestRandomModelRegression.fitTest()
TestRandomModelRegression.getAllDescriptors()
TestRandomModelRegression.getAllProteinDescriptors()
TestRandomModelRegression.getBigDF()
TestRandomModelRegression.getDataPrepGrid()
TestRandomModelRegression.getDefaultCalculatorCombo()
TestRandomModelRegression.getDefaultPrep()
TestRandomModelRegression.getMSAProvider()
TestRandomModelRegression.getModel()
TestRandomModelRegression.getPCMDF()
TestRandomModelRegression.getPCMSeqProvider()
TestRandomModelRegression.getPCMTargetsDF()
TestRandomModelRegression.getParamGrid()
TestRandomModelRegression.getPrepCombos()
TestRandomModelRegression.getSmallDF()
TestRandomModelRegression.gridFile
TestRandomModelRegression.id()
TestRandomModelRegression.longMessage
TestRandomModelRegression.maxDiff
TestRandomModelRegression.predictorTest()
TestRandomModelRegression.run()
TestRandomModelRegression.setUp()
TestRandomModelRegression.setUpClass()
TestRandomModelRegression.setUpPaths()
TestRandomModelRegression.shortDescription()
TestRandomModelRegression.skipTest()
TestRandomModelRegression.subTest()
TestRandomModelRegression.tearDown()
TestRandomModelRegression.tearDownClass()
TestRandomModelRegression.testRegressionBasicFit
TestRandomModelRegression.testRegressionBasicFit_0_RandomModel()
TestRandomModelRegression.testRegressionBasicFit_1_RandomModel()
TestRandomModelRegression.testRegressionBasicFit_2_RandomModel()
TestRandomModelRegression.testRegressionMultiTaskFit
TestRandomModelRegression.testRegressionMultiTaskFit_0_RandomModel()
TestRandomModelRegression.testRegressionMultiTaskFit_1_RandomModel()
TestRandomModelRegression.testRegressionMultiTaskFit_2_RandomModel()
TestRandomModelRegression.validate_split()
- Module contents
- qsprpred.extra.utils package
- Submodules
- qsprpred.extra.utils.parallel module
- qsprpred.extra.utils.tests module
TestDaskGenerator
TestDaskGenerator.addClassCleanup()
TestDaskGenerator.addCleanup()
TestDaskGenerator.addTypeEqualityFunc()
TestDaskGenerator.assertAlmostEqual()
TestDaskGenerator.assertCountEqual()
TestDaskGenerator.assertDictEqual()
TestDaskGenerator.assertEqual()
TestDaskGenerator.assertFalse()
TestDaskGenerator.assertGreater()
TestDaskGenerator.assertGreaterEqual()
TestDaskGenerator.assertIn()
TestDaskGenerator.assertIs()
TestDaskGenerator.assertIsInstance()
TestDaskGenerator.assertIsNone()
TestDaskGenerator.assertIsNot()
TestDaskGenerator.assertIsNotNone()
TestDaskGenerator.assertLess()
TestDaskGenerator.assertLessEqual()
TestDaskGenerator.assertListEqual()
TestDaskGenerator.assertLogs()
TestDaskGenerator.assertMultiLineEqual()
TestDaskGenerator.assertNoLogs()
TestDaskGenerator.assertNotAlmostEqual()
TestDaskGenerator.assertNotEqual()
TestDaskGenerator.assertNotIn()
TestDaskGenerator.assertNotIsInstance()
TestDaskGenerator.assertNotRegex()
TestDaskGenerator.assertRaises()
TestDaskGenerator.assertRaisesRegex()
TestDaskGenerator.assertRegex()
TestDaskGenerator.assertSequenceEqual()
TestDaskGenerator.assertSetEqual()
TestDaskGenerator.assertTrue()
TestDaskGenerator.assertTupleEqual()
TestDaskGenerator.assertWarns()
TestDaskGenerator.assertWarnsRegex()
TestDaskGenerator.countTestCases()
TestDaskGenerator.debug()
TestDaskGenerator.defaultTestResult()
TestDaskGenerator.doClassCleanups()
TestDaskGenerator.doCleanups()
TestDaskGenerator.enterClassContext()
TestDaskGenerator.enterContext()
TestDaskGenerator.fail()
TestDaskGenerator.failureException
TestDaskGenerator.func()
TestDaskGenerator.func_batched()
TestDaskGenerator.id()
TestDaskGenerator.longMessage
TestDaskGenerator.maxDiff
TestDaskGenerator.run()
TestDaskGenerator.setUp()
TestDaskGenerator.setUpClass()
TestDaskGenerator.shortDescription()
TestDaskGenerator.skipTest()
TestDaskGenerator.subTest()
TestDaskGenerator.tearDown()
TestDaskGenerator.tearDownClass()
TestDaskGenerator.testBatched()
TestDaskGenerator.testSimple()
- Module contents