Changelog¶
1.0.0 - 2026-10-06¶
Initial public release of COFOLDER.
Added¶
- Bias, Validate, Screen, and Oracle workflows.
- Support for Boltz1, Boltz2, Boltz Community, and OpenFold3 backends.
- Protein, ligand, DNA, RNA, and backend-specific constraint inputs.
- Structural validation, interaction fingerprints, reference-overlap diagnostics, and screening filters and clustering.
- Python API with composite Oracle objectives and structure gates.
- Structured public outputs with execution and metric provenance.
- Installation guides, API documentation, examples, and interactive tutorials.
0.1.0 - 2026-08-06¶
Development snapshot used for the COFOLDER manuscript. This version is retained as the manuscript reference version.